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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs9587536 chr13:108895741 A/G 1.84E-9 486 15.2 17.73 14.22 KM Plot
THCA rs9587538 chr13:108905475 T/C 2.14E-9 484 15.2 17.73 14.22 KM Plot
THCA rs9606062 chr22:19535132 G/A 2.39E-8 473 16.02 16.97 11.05 KM Plot
THCA rs9606068 chr22:19548079 G/A 2.07E-6 484 15.97 15 11.05 KM Plot
THCA rs9606069 chr22:19551162 A/G 1.97E-5 472 15.9 15.3 14.33 KM Plot
THCA rs9606072 chr22:19554319 G/T 1.95E-5 472 15.9 15.7 14.33 KM Plot
THCA rs961320 chr12:49297864 C/T 0.000317 484 17.02 15.9 13.93 KM Plot
THCA rs963133 chr2:48308868 A/T 9.57E-6 490 14.73 16.3 15.23 KM Plot
THCA rs963134 chr2:48308608 C/T 2.01E-5 487 14.85 17.47 14.55 KM Plot
THCA rs9660037 chr1:91752475 G/T 8.35E-6 486 15.65 17.03 17.77 KM Plot
THCA rs9662393 chr1:91752623 C/T 8.35E-6 486 15.65 17.03 17.77 KM Plot
THCA rs9665678 chr10:82233542 C/G 1.83E-7 467 16.67 14.57 14.93 KM Plot
THCA rs9676736 chr19:58234915 T/C 7.62E-5 487 15.17 17.23 16.23 KM Plot
THCA rs9679395 chr2:29131440 T/C 0.00011 490 14.3 15.22 16.07 KM Plot
THCA rs9690155 chr7:5871026 C/T 3.59E-5 490 15.97 16.33 13.57 KM Plot